STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB39949.1Sortase family protein; RAAC2_WWE3_1_2. (225 aa)    
Predicted Functional Partners:
AHB39948.1
Putative repeat protein; RAAC2_WWE3_1_1.
     
 0.783
AHB39950.1
Hypothetical protein; RAAC2_WWE3_1_3.
       0.550
AHB39951.1
Hypothetical protein; RAAC2_WWE3_1_4.
 
   
 0.508
AHB40605.1
Hypothetical protein; RAAC2_WWE3_1_660.
 
     0.499
AHB40387.1
Hypothetical protein; RAAC2_WWE3_1_442.
  
    0.432
Your Current Organism:
candidate division WWE3 bacterium RAAC2WWE31
NCBI taxonomy Id: 1394710
Other names: c. division WWE3 bacterium RAAC2_WWE3_1, candidate division WWE3 bacterium RAAC2_WWE3_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.