STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB39960.1Hypothetical protein; RAAC2_WWE3_1_13. (385 aa)    
Predicted Functional Partners:
AHB40707.1
Hypothetical protein; RAAC2_WWE3_1_762.
 
 
 0.957
AHB39961.1
Regulatory protein RecX; RAAC2_WWE3_1_14.
  
 
 0.950
AHB40455.1
Hypothetical protein; RAAC2_WWE3_1_510.
  
 0.932
AHB39956.1
Hypothetical protein; RAAC2_WWE3_1_9.
    
 0.917
AHB40674.1
Hypothetical protein; RAAC2_WWE3_1_729.
  
 0.901
lexA
LexA repressor; RAAC2_WWE3_1_149.
  
 0.879
AHB39959.1
Hypothetical protein; RAAC2_WWE3_1_12.
  
 
 0.877
AHB40211.1
Nucleotidyltransferase/DNA polymerase involved in DNA repair; RAAC2_WWE3_1_264.
  
 0.876
AHB39998.1
Hypothetical protein; RAAC2_WWE3_1_51.
   
 0.867
AHB40568.1
Hypothetical protein; RAAC2_WWE3_1_623.
  
 0.862
Your Current Organism:
candidate division WWE3 bacterium RAAC2WWE31
NCBI taxonomy Id: 1394710
Other names: c. division WWE3 bacterium RAAC2_WWE3_1, candidate division WWE3 bacterium RAAC2_WWE3_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.