STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB40164.1rRNA (Adenine-N(6)-)-methyltransferase; RAAC2_WWE3_1_217. (286 aa)    
Predicted Functional Partners:
AHB39989.1
Hypothetical protein; RAAC2_WWE3_1_42.
  
 0.970
rpsC
30S ribosomal protein S3; RAAC2_WWE3_1_66.
  
 0.961
AHB40003.1
Hypothetical protein; RAAC2_WWE3_1_56.
  
 0.893
AHB40201.1
Hypothetical protein; RAAC2_WWE3_1_254.
  
 0.889
AHB39971.1
Hypothetical protein; RAAC2_WWE3_1_24.
  
 0.887
rpsB
30S ribosomal protein S2; RAAC2_WWE3_1_503.
  
 0.883
AHB40016.1
Hypothetical protein; RAAC2_WWE3_1_69.
  
 0.882
AHB39990.1
Hypothetical protein; RAAC2_WWE3_1_43.
   
 0.881
AHB40535.1
30S ribosomal protein S1; RAAC2_WWE3_1_590.
  
 0.837
AHB40006.1
Hypothetical protein; RAAC2_WWE3_1_59.
  
 
 0.830
Your Current Organism:
candidate division WWE3 bacterium RAAC2WWE31
NCBI taxonomy Id: 1394710
Other names: c. division WWE3 bacterium RAAC2_WWE3_1, candidate division WWE3 bacterium RAAC2_WWE3_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.