STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB41896.1Hypothetical protein; RAAC3_TM7_1_19. (150 aa)    
Predicted Functional Partners:
AHB41897.1
Cytidyltransferase-related protein; RAAC3_TM7_1_20.
       0.474
AHB41895.1
LemA-like protein; RAAC3_TM7_1_18.
       0.469
AHB41887.1
Hypothetical protein; RAAC3_TM7_1_10.
       0.414
AHB41888.1
Hypothetical protein; RAAC3_TM7_1_11.
       0.414
AHB41889.1
Hypothetical protein; RAAC3_TM7_1_12.
       0.414
AHB41890.1
Hypothetical protein; RAAC3_TM7_1_13.
       0.414
AHB41891.1
Hypothetical protein; RAAC3_TM7_1_14.
       0.414
ligA
DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.
       0.414
AHB41893.1
Hypothetical protein; RAAC3_TM7_1_16.
       0.414
htpX
Hypothetical protein; RAAC3_TM7_1_17; Belongs to the peptidase M48B family.
       0.414
Your Current Organism:
Saccharibacteria bacterium RAAC3TM71
NCBI taxonomy Id: 1394711
Other names: C. Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria bacterium RAAC3_TM7_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.