STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB42100.1ABC-2 type transporter; RAAC3_TM7_1_227. (369 aa)    
Predicted Functional Partners:
AHB42101.1
Nodulation ATP-binding protein I; RAAC3_TM7_1_228.
 
  
 0.968
AHB42383.1
ABC transporter ATP-binding protein; RAAC3_TM7_1_514.
 
  
 0.671
AHB42099.1
Hypothetical protein; RAAC3_TM7_1_226.
       0.634
AHB41888.1
Hypothetical protein; RAAC3_TM7_1_11.
 
  
 0.595
AHB42102.1
Hypothetical protein; RAAC3_TM7_1_229.
       0.579
AHB41887.1
Hypothetical protein; RAAC3_TM7_1_10.
  
  
  0.548
AHB42103.1
Hypothetical protein; RAAC3_TM7_1_230.
       0.447
AHB42414.1
Putative membrane associated protease; RAAC3_TM7_1_545.
  
  
 0.440
AHB42104.1
Hypothetical protein; RAAC3_TM7_1_231.
     
 0.404
AHB42168.1
ABC-2 type transporter; RAAC3_TM7_1_298.
    
  0.400
Your Current Organism:
Saccharibacteria bacterium RAAC3TM71
NCBI taxonomy Id: 1394711
Other names: C. Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria bacterium RAAC3_TM7_1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.