STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB42181.1Type IV secretory pathway VirB4 component-like protein; RAAC3_TM7_1_312. (635 aa)    
Predicted Functional Partners:
AHB42182.1
Hypothetical protein; RAAC3_TM7_1_313.
  
 0.996
AHB42184.1
Hypothetical protein; RAAC3_TM7_1_315.
 
  
 0.949
AHB42186.1
Hypothetical protein; RAAC3_TM7_1_317.
 
  
 0.887
AHB42180.1
Hypothetical protein; RAAC3_TM7_1_311.
     
 0.815
AHB42343.1
Hypothetical protein; RAAC3_TM7_1_474.
 
  
 0.761
AHB42178.1
Hypothetical protein; RAAC3_TM7_1_308.
       0.757
AHB42179.1
Hypothetical protein; RAAC3_TM7_1_309.
       0.757
AHB41952.1
Hypothetical protein; RAAC3_TM7_1_77.
 
  
 0.748
AHB42479.1
Hypothetical protein; RAAC3_TM7_1_610.
 
  
 0.722
AHB42183.1
Hypothetical protein; RAAC3_TM7_1_314.
       0.660
Your Current Organism:
Saccharibacteria bacterium RAAC3TM71
NCBI taxonomy Id: 1394711
Other names: C. Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria bacterium RAAC3_TM7_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.