STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB42306.1Hypothetical protein; RAAC3_TM7_1_437. (241 aa)    
Predicted Functional Partners:
AHB42305.1
Type IV pilus assembly protein PilM; RAAC3_TM7_1_436.
       0.779
AHB42307.1
Hypothetical protein; RAAC3_TM7_1_438.
       0.779
AHB42308.1
Hypothetical protein; RAAC3_TM7_1_439.
       0.779
AHB42309.1
Type II secretion system protein E; RAAC3_TM7_1_440.
       0.773
AHB42310.1
Twitching motility protein; RAAC3_TM7_1_441.
       0.752
AHB42311.1
Pilin biogenesis protein; RAAC3_TM7_1_442.
       0.674
AHB42304.1
Hypothetical protein; RAAC3_TM7_1_435.
       0.615
AHB42303.1
Hypothetical protein; RAAC3_TM7_1_434.
       0.608
AHB42312.1
Hypothetical protein; RAAC3_TM7_1_443.
       0.495
Your Current Organism:
Saccharibacteria bacterium RAAC3TM71
NCBI taxonomy Id: 1394711
Other names: C. Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria bacterium RAAC3_TM7_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.