STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB42432.1Choline binding protein D, nonfunctional; RAAC3_TM7_1_563. (378 aa)    
Predicted Functional Partners:
AHB42431.1
Cell division protein FtsX; RAAC3_TM7_1_562; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.916
ftsE
Cell division ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.
 
  
 0.837
AHB41920.1
CHAP protein; RAAC3_TM7_1_45.
  
  
0.690
AHB42433.1
Carboxyl-terminal protease; RAAC3_TM7_1_564; Belongs to the peptidase S41A family.
       0.681
prfB
Peptide chain release factor 2, programmed frameshift; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
  
    0.639
AHB42597.1
Hypothetical protein; RAAC3_TM7_1_728.
 
   
 0.632
AHB42396.1
Cell envelope-related function transcriptional attenuator, LytR/CpsA family protein, nonfunctional; RAAC3_TM7_1_527.
  
  
 0.625
AHB42157.1
Curculin protein; RAAC3_TM7_1_284.
  
  
 0.613
AHB42398.1
Protease Do; RAAC3_TM7_1_529.
     
 0.601
AHB42434.1
PAS/PAC sensor hybrid histidine kinase; RAAC3_TM7_1_565.
  
  
 0.572
Your Current Organism:
Saccharibacteria bacterium RAAC3TM71
NCBI taxonomy Id: 1394711
Other names: C. Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria bacterium RAAC3_TM7_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.