STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB42461.1Hypothetical protein; RAAC3_TM7_1_592. (325 aa)    
Predicted Functional Partners:
AHB42458.1
Hypothetical protein; RAAC3_TM7_1_589.
       0.582
AHB42459.1
N-acetyltransferase GCN5; RAAC3_TM7_1_590.
       0.581
AHB42460.1
Hypothetical protein; RAAC3_TM7_1_591; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
       0.581
AHB42454.1
Peptidyl-prolyl cis-trans isomerase; RAAC3_TM7_1_585.
       0.536
AHB42455.1
Hypothetical protein; RAAC3_TM7_1_586.
       0.536
AHB42456.1
Hypothetical protein; RAAC3_TM7_1_587.
       0.536
AHB42457.1
Hypothetical protein; RAAC3_TM7_1_588; Belongs to the peptidase S51 family.
       0.536
sigY
RNA polymerase sigma factor Y; RAAC3_TM7_1_583; Belongs to the sigma-70 factor family. ECF subfamily.
       0.402
AHB42453.1
YunG; RAAC3_TM7_1_584.
       0.402
Your Current Organism:
Saccharibacteria bacterium RAAC3TM71
NCBI taxonomy Id: 1394711
Other names: C. Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria bacterium RAAC3_TM7_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.