STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHB42710.1FAD-dependent pyridine nucleotide-disulfide oxidoreductase; RAAC3_TM7_1_842. (323 aa)    
Predicted Functional Partners:
pheT
Phenylalanine-tRNA ligase beta subunit; RAAC3_TM7_1_845; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
  
 
 0.864
AHB42711.1
Fkbp-type peptidyl-prolyl; RAAC3_TM7_1_843.
     
 0.795
AHB42712.1
ABC transporter-related protein; RAAC3_TM7_1_844.
     
 0.651
AHB42714.1
Dimethyladenosine transferase; RAAC3_TM7_1_846.
     
 0.583
AHB42719.1
Phenylalanine-tRNA ligase; RAAC3_TM7_1_851; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.577
AHB42093.1
Pyridine nucleotide-disulfide oxidoreductase; RAAC3_TM7_1_218.
  
 
 0.574
AHB42715.1
Hypothetical protein; RAAC3_TM7_1_847.
       0.555
AHB42716.1
Hypothetical protein; RAAC3_TM7_1_848.
       0.555
AHB42717.1
Hypothetical protein; RAAC3_TM7_1_849.
       0.549
AHB42535.1
UvrD/REP helicase; RAAC3_TM7_1_666; Belongs to the helicase family. UvrD subfamily.
 
  
 0.510
Your Current Organism:
Saccharibacteria bacterium RAAC3TM71
NCBI taxonomy Id: 1394711
Other names: C. Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria bacterium RAAC3_TM7_1
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