STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsBHypothetical protein; RAAC4_OD1_1_69; Belongs to the universal ribosomal protein uS2 family. (232 aa)    
Predicted Functional Partners:
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
  
 0.999
rplL
50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
  
 
 0.999
rpmF
50S ribosomal protein L32; RAAC4_OD1_1_47; Belongs to the bacterial ribosomal protein bL32 family.
  
 
 0.999
rpsP
Ribosomal protein S16; RAAC4_OD1_1_54.
  
 0.999
tsf
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
 0.999
ETB63640.1
Hypothetical protein; RAAC4_OD1_1_91.
  
 
 0.999
ETB63700.1
LSU ribosomal protein L9p; RAAC4_OD1_1_151.
  
 
 0.999
rpmA
50S ribosomal protein L27; RAAC4_OD1_1_153.
  
 
 0.999
ETB63715.1
Hypothetical protein; RAAC4_OD1_1_166.
  
   0.999
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
  
 
 0.999
Your Current Organism:
Parcubacteria bacterium RAAC4OD11
NCBI taxonomy Id: 1394712
Other names: P. bacterium RAAC4_OD1_1, Parcubacteria bacterium RAAC4_OD1_1, candidate division OD1 bacterium RAAC4_OD1_1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.