STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000739615_00630Unannotated protein. (407 aa)    
Predicted Functional Partners:
GCA_000739615_03903
Unannotated protein.
 
 0.992
GCA_000739615_03952
Unannotated protein.
 
 0.986
GCA_000739615_05122
Unannotated protein.
 
 
 0.817
GCA_000739615_05126
Unannotated protein.
     
 0.800
GCA_000739615_05128
Unannotated protein.
     
 0.765
GCA_000739615_00629
Unannotated protein.
 
  
 0.683
GCA_000739615_01897
Unannotated protein.
 
   
 0.670
GCA_000739615_01420
Unannotated protein.
 
  
 0.608
GCA_000739615_02536
Unannotated protein.
 
     0.595
GCA_000739615_00277
Unannotated protein.
  
 
 0.589
Your Current Organism:
Haloferula sp. BvORR071
NCBI taxonomy Id: 1396141
Other names: H. sp. BvORR071
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.