STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000739615_00692Unannotated protein. (440 aa)    
Predicted Functional Partners:
GCA_000739615_01461
Unannotated protein.
  
 0.963
GCA_000739615_04039
Unannotated protein.
   
 0.957
GCA_000739615_06412
Unannotated protein.
 
 
  0.800
GCA_000739615_03457
Unannotated protein.
  
 
 
0.749
GCA_000739615_03470
Unannotated protein.
   
  0.681
GCA_000739615_04325
Unannotated protein.
     
 0.680
GCA_000739615_05724
Unannotated protein.
  
 
  0.667
GCA_000739615_05872
Unannotated protein.
  
     0.635
GCA_000739615_03427
Unannotated protein.
    
 0.627
GCA_000739615_01220
Unannotated protein.
    
  0.624
Your Current Organism:
Haloferula sp. BvORR071
NCBI taxonomy Id: 1396141
Other names: H. sp. BvORR071
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.