STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000739615_06290Unannotated protein. (783 aa)    
Predicted Functional Partners:
GCA_000739615_01420
Unannotated protein.
    
  0.743
GCA_000739615_06291
Unannotated protein.
       0.510
GCA_000739615_01893
Unannotated protein.
  
     0.501
GCA_000739615_00698
Unannotated protein.
  
     0.500
GCA_000739615_04335
Unannotated protein.
 
     0.495
GCA_000739615_06289
Unannotated protein.
       0.488
GCA_000739615_01907
Unannotated protein.
  
  
  0.483
GCA_000739615_06309
Unannotated protein.
  
     0.425
GCA_000739615_05917
Unannotated protein.
  
  
  0.413
GCA_000739615_02637
Unannotated protein.
  
  
  0.410
Your Current Organism:
Haloferula sp. BvORR071
NCBI taxonomy Id: 1396141
Other names: H. sp. BvORR071
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.