STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000739635_01664Unannotated protein. (430 aa)    
Predicted Functional Partners:
GCA_000739635_04509
Unannotated protein.
 
 0.992
GCA_000739635_07052
Unannotated protein.
  
 0.964
GCA_000739635_06071
Unannotated protein.
 
 0.946
GCA_000739635_01907
Unannotated protein.
  
 
 0.852
GCA_000739635_02893
Unannotated protein.
  
 
 0.852
GCA_000739635_01906
Unannotated protein.
  
 
 0.842
GCA_000739635_03937
Unannotated protein.
   
 
 0.827
GCA_000739635_03664
Unannotated protein.
  
 
 0.818
GCA_000739635_06018
Unannotated protein.
 
 0.814
GCA_000739635_05355
Unannotated protein.
    
 0.802
Your Current Organism:
Verrucomicrobium sp. BvORR034
NCBI taxonomy Id: 1396418
Other names: V. sp. BvORR034
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.