STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soj_6Sporulation initiation inhibitor protein soj. (466 aa)    
Predicted Functional Partners:
CUI01643.1
Plasmid partitioning protein RepB.
 
 0.945
CUH99555.1
Plasmid partitioning protein RepB.
 
 0.888
parB_1
Chromosome-partitioning protein ParB; Belongs to the ParB family.
 
 
 0.798
CUI01641.1
Replication initiator protein A.
 
   
 0.783
CUH98453.1
Plasmid partitioning protein RepB.
 
 0.778
parB_2
Chromosome-partitioning protein ParB; Belongs to the ParB family.
 
 
 0.702
CUH98272.1
Replication initiation protein RepC.
 
   
 0.661
CUH99553.1
Protein involved in initiation of plasmid replication.
 
     0.656
CUH98574.1
Replication initiation protein RepC.
 
   
 0.630
parB_3
Chromosome-partitioning protein ParB; Belongs to the ParB family.
 
 
 0.568
Your Current Organism:
Leisingera aquaemixtae
NCBI taxonomy Id: 1396826
Other names: CECT 8399, KCTC 32538, L. aquaemixtae, Leisingera aquaemixtae (Park et al. 2014) Breider et al. 2014, Phaeobacter aquaemixtae, Phaeobacter aquaemixtae Park et al. 2014, Phaeobacter sp. SSK6-1, strain SSK6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.