Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182LS81 | A0A182LSN2 | Uncharacterized protein. | Uncharacterized protein. | 0.847 |
A0A182LS81 | A0A182LW28 | Uncharacterized protein. | Uncharacterized protein; Belongs to the actin family. | 0.783 |
A0A182LS81 | A0A182M656 | Uncharacterized protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.896 |
A0A182LS81 | A0A182MAZ1 | Uncharacterized protein. | 60S ribosomal protein L40. | 0.791 |
A0A182LS81 | A0A182MJR9 | Uncharacterized protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.859 |
A0A182LS81 | A0A182MKS5 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.782 |
A0A182LS81 | A0A182MRA6 | Uncharacterized protein. | Uncharacterized protein. | 0.770 |
A0A182LS81 | A0A182MSM8 | Uncharacterized protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.832 |
A0A182LS81 | A0A182MVC4 | Uncharacterized protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.747 |
A0A182LS81 | A0A182MWY7 | Uncharacterized protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | 0.782 |
A0A182LSN2 | A0A182LS81 | Uncharacterized protein. | Uncharacterized protein. | 0.847 |
A0A182LSN2 | A0A182MKS5 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.986 |
A0A182LW28 | A0A182LS81 | Uncharacterized protein; Belongs to the actin family. | Uncharacterized protein. | 0.783 |
A0A182LW28 | A0A182MKS5 | Uncharacterized protein; Belongs to the actin family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.581 |
A0A182LW28 | A0A182MWY7 | Uncharacterized protein; Belongs to the actin family. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which is involved in transcriptional regulation, DNA replication and probably DNA repair. | 0.998 |
A0A182M656 | A0A182LS81 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Uncharacterized protein. | 0.896 |
A0A182M656 | A0A182MAZ1 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 60S ribosomal protein L40. | 0.982 |
A0A182M656 | A0A182MJR9 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. | 0.999 |
A0A182M656 | A0A182MKS5 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.596 |
A0A182M656 | A0A182MSM8 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.900 |
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