A0A182LXN8 protein (Anopheles culicifacies) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182LXN8

WD_REPEATS_REGION domain-containing protein. (543 aa)

Predicted Functional Partners:

A0A182MW67

0.845

A0A182LYH4

0.834

A0A182MKB1

0.804

A0A2C9GUK8

0.787

A0A182MMP2

0.782

A0A182MHW9

0.778

A0A182MW21

0.765

A0A182MCA6

0.743

A0A182MCP3

0.736

A0A182MI35

0.735

Your Current Organism:

Anopheles culicifacies

NCBI taxonomy Id: 139723
Other names: A. culicifacies

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182LXN8	A0A182LYH4	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.834
A0A182LXN8	A0A182MCA6	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.743
A0A182LXN8	A0A182MCP3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.736
A0A182LXN8	A0A182MHW9	WD_REPEATS_REGION domain-containing protein.	TPR_REGION domain-containing protein.	0.778
A0A182LXN8	A0A182MI35	WD_REPEATS_REGION domain-containing protein.	CPSF_A domain-containing protein.	0.735
A0A182LXN8	A0A182MKB1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.804
A0A182LXN8	A0A182MMP2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.782
A0A182LXN8	A0A182MW21	WD_REPEATS_REGION domain-containing protein.	Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.	0.765
A0A182LXN8	A0A182MW67	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.845
A0A182LXN8	A0A2C9GUK8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.787
A0A182LYH4	A0A182LXN8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.834
A0A182LYH4	A0A182MCA6	Uncharacterized protein.	Uncharacterized protein.	0.580
A0A182LYH4	A0A182MW67	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A182MCA6	A0A182LXN8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.743
A0A182MCA6	A0A182LYH4	Uncharacterized protein.	Uncharacterized protein.	0.580
A0A182MCA6	A0A182MCP3	Uncharacterized protein.	Uncharacterized protein.	0.573
A0A182MCP3	A0A182LXN8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.736
A0A182MCP3	A0A182MCA6	Uncharacterized protein.	Uncharacterized protein.	0.573
A0A182MCP3	A0A182MW67	Uncharacterized protein.	Uncharacterized protein.	0.967
A0A182MHW9	A0A182LXN8	TPR_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.778