A0A182M497 protein (Anopheles culicifacies) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182M497

SRP54 domain-containing protein. (635 aa)

Predicted Functional Partners:

SRP54

0.998

A0A182LTQ2

0.997

A0A182MHR7

0.980

A0A182LVI5

0.979

A0A182LTN0

0.976

A0A182M864

0.975

A0A182LX22

0.970

A0A182M844

0.967

A0A182MVK4

0.963

A0A182MIH0

0.956

Your Current Organism:

Anopheles culicifacies

NCBI taxonomy Id: 139723
Other names: A. culicifacies

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A182LTN0	A0A182LTQ2	A0A182LTN0	A0A182LTQ2	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein.	0.780
A0A182LTN0	A0A182LVI5	A0A182LTN0	A0A182LVI5	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.945
A0A182LTN0	A0A182LX22	A0A182LTN0	A0A182LX22	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein.	0.955
A0A182LTN0	A0A182M497	A0A182LTN0	A0A182M497	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	SRP54 domain-containing protein.	0.976
A0A182LTN0	A0A182M844	A0A182LTN0	A0A182M844	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Plug_translocon domain-containing protein.	0.999
A0A182LTN0	A0A182M864	A0A182LTN0	A0A182M864	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	60S ribosomal protein L5.	0.999
A0A182LTN0	A0A182MHR7	A0A182LTN0	A0A182MHR7	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	SRP72 domain-containing protein.	0.931
A0A182LTN0	A0A182MIH0	A0A182LTN0	A0A182MIH0	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.999
A0A182LTN0	A0A182MVK4	A0A182LTN0	A0A182MVK4	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.999
A0A182LTN0	SRP54	A0A182LTN0	A0A182MHU1	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.995
A0A182LTQ2	A0A182LTN0	A0A182LTQ2	A0A182LTN0	Uncharacterized protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.780
A0A182LTQ2	A0A182LVI5	A0A182LTQ2	A0A182LVI5	Uncharacterized protein.	Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.	0.964
A0A182LTQ2	A0A182LX22	A0A182LTQ2	A0A182LX22	Uncharacterized protein.	Uncharacterized protein.	0.958
A0A182LTQ2	A0A182M497	A0A182LTQ2	A0A182M497	Uncharacterized protein.	SRP54 domain-containing protein.	0.997
A0A182LTQ2	A0A182M844	A0A182LTQ2	A0A182M844	Uncharacterized protein.	Plug_translocon domain-containing protein.	0.774
A0A182LTQ2	A0A182M864	A0A182LTQ2	A0A182M864	Uncharacterized protein.	60S ribosomal protein L5.	0.826
A0A182LTQ2	A0A182MHR7	A0A182LTQ2	A0A182MHR7	Uncharacterized protein.	SRP72 domain-containing protein.	0.962
A0A182LTQ2	A0A182MIH0	A0A182LTQ2	A0A182MIH0	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.	0.804
A0A182LTQ2	A0A182MVK4	A0A182LTQ2	A0A182MVK4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.	0.678
A0A182LTQ2	SRP54	A0A182LTQ2	A0A182MHU1	Uncharacterized protein.	Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.	0.970