Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A182M213 | A0A182M6Y7 | A0A182M213 | A0A182M6Y7 | SH2 domain-containing protein. | Tyrosine-protein kinase. | 0.881 |
A0A182M213 | A0A182MC38 | A0A182M213 | A0A182MC38 | SH2 domain-containing protein. | Uncharacterized protein. | 0.672 |
A0A182M213 | A0A182MV37 | A0A182M213 | A0A182MV37 | SH2 domain-containing protein. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.723 |
A0A182M4M5 | A0A182M6Y7 | A0A182M4M5 | A0A182M6Y7 | SH3 domain-containing protein. | Tyrosine-protein kinase. | 0.881 |
A0A182M4M5 | A0A182MC38 | A0A182M4M5 | A0A182MC38 | SH3 domain-containing protein. | Uncharacterized protein. | 0.672 |
A0A182M583 | A0A182M6Y7 | A0A182M583 | A0A182M6Y7 | Uncharacterized protein. | Tyrosine-protein kinase. | 0.881 |
A0A182M583 | A0A182MC38 | A0A182M583 | A0A182MC38 | Uncharacterized protein. | Uncharacterized protein. | 0.672 |
A0A182M583 | A0A182MD62 | A0A182M583 | A0A182MD62 | Uncharacterized protein. | Tyrosine-protein kinase. | 0.457 |
A0A182M5M6 | A0A182MC38 | A0A182M5M6 | A0A182MC38 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.592 |
A0A182M5M6 | MED10 | A0A182M5M6 | A0A182M1M7 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
A0A182M5M6 | MED17 | A0A182M5M6 | A0A182LV17 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.998 |
A0A182M5M6 | MED4 | A0A182M5M6 | A0A182M6M3 | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 4; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.994 |
A0A182M6Y7 | A0A182M213 | A0A182M6Y7 | A0A182M213 | Tyrosine-protein kinase. | SH2 domain-containing protein. | 0.881 |
A0A182M6Y7 | A0A182M4M5 | A0A182M6Y7 | A0A182M4M5 | Tyrosine-protein kinase. | SH3 domain-containing protein. | 0.881 |
A0A182M6Y7 | A0A182M583 | A0A182M6Y7 | A0A182M583 | Tyrosine-protein kinase. | Uncharacterized protein. | 0.881 |
A0A182M6Y7 | A0A182MC38 | A0A182M6Y7 | A0A182MC38 | Tyrosine-protein kinase. | Uncharacterized protein. | 0.667 |
A0A182M6Y7 | A0A182MD62 | A0A182M6Y7 | A0A182MD62 | Tyrosine-protein kinase. | Tyrosine-protein kinase. | 0.902 |
A0A182M6Y7 | A0A182MV37 | A0A182M6Y7 | A0A182MV37 | Tyrosine-protein kinase. | Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. | 0.888 |
A0A182MC38 | A0A182M213 | A0A182MC38 | A0A182M213 | Uncharacterized protein. | SH2 domain-containing protein. | 0.672 |
A0A182MC38 | A0A182M4M5 | A0A182MC38 | A0A182M4M5 | Uncharacterized protein. | SH3 domain-containing protein. | 0.672 |
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