Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A182M049 | A0A182MB67 | A0A182M049 | A0A182MB67 | Ku domain-containing protein. | Uncharacterized protein. | 0.730 |
A0A182M049 | A0A182MKS5 | A0A182M049 | A0A182MKS5 | Ku domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.914 |
A0A182M049 | A0A182MLS2 | A0A182M049 | A0A182MLS2 | Ku domain-containing protein. | Uncharacterized protein. | 0.777 |
A0A182M049 | A0A182MMI6 | A0A182M049 | A0A182MMI6 | Ku domain-containing protein. | Uncharacterized protein. | 0.483 |
A0A182M049 | A0A182MVC7 | A0A182M049 | A0A182MVC7 | Ku domain-containing protein. | Uncharacterized protein. | 0.791 |
A0A182M049 | Fen1 | A0A182M049 | A0A182MFJ3 | Ku domain-containing protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.779 |
A0A182MB67 | A0A182M049 | A0A182MB67 | A0A182M049 | Uncharacterized protein. | Ku domain-containing protein. | 0.730 |
A0A182MB67 | A0A182MCP9 | A0A182MB67 | A0A182MCP9 | Uncharacterized protein. | Uncharacterized protein. | 0.571 |
A0A182MB67 | A0A182MLS2 | A0A182MB67 | A0A182MLS2 | Uncharacterized protein. | Uncharacterized protein. | 0.749 |
A0A182MB67 | A0A182MMI6 | A0A182MB67 | A0A182MMI6 | Uncharacterized protein. | Uncharacterized protein. | 0.693 |
A0A182MB67 | A0A182MNY2 | A0A182MB67 | A0A182MNY2 | Uncharacterized protein. | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | 0.986 |
A0A182MB67 | A0A182MVC7 | A0A182MB67 | A0A182MVC7 | Uncharacterized protein. | Uncharacterized protein. | 0.798 |
A0A182MB67 | A0A182MWI1 | A0A182MB67 | A0A182MWI1 | Uncharacterized protein. | Uncharacterized protein. | 0.571 |
A0A182MCP9 | A0A182MB67 | A0A182MCP9 | A0A182MB67 | Uncharacterized protein. | Uncharacterized protein. | 0.571 |
A0A182MCP9 | A0A182MD27 | A0A182MCP9 | A0A182MD27 | Uncharacterized protein. | Uncharacterized protein. | 0.459 |
A0A182MCP9 | A0A182MLS2 | A0A182MCP9 | A0A182MLS2 | Uncharacterized protein. | Uncharacterized protein. | 0.871 |
A0A182MCP9 | A0A182MNY2 | A0A182MCP9 | A0A182MNY2 | Uncharacterized protein. | DNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. | 0.617 |
A0A182MCP9 | Fen1 | A0A182MCP9 | A0A182MFJ3 | Uncharacterized protein. | Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] | 0.659 |
A0A182MD27 | A0A182MCP9 | A0A182MD27 | A0A182MCP9 | Uncharacterized protein. | Uncharacterized protein. | 0.459 |
A0A182MD27 | A0A182MKS5 | A0A182MD27 | A0A182MKS5 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.481 |
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