Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182LS03 | A0A182LYZ5 | DNA polymerase. | Uncharacterized protein. | 0.593 |
A0A182LS03 | A0A182M6B1 | DNA polymerase. | ERCC4 domain-containing protein. | 0.836 |
A0A182LS03 | A0A182MAG6 | DNA polymerase. | Uncharacterized protein. | 0.999 |
A0A182LS03 | A0A182MM60 | DNA polymerase. | Uncharacterized protein. | 0.723 |
A0A182LYZ5 | A0A182LS03 | Uncharacterized protein. | DNA polymerase. | 0.593 |
A0A182LYZ5 | A0A182M1F5 | Uncharacterized protein. | PDZ domain-containing protein. | 0.649 |
A0A182LYZ5 | A0A182MM60 | Uncharacterized protein. | Uncharacterized protein. | 0.783 |
A0A182LYZ5 | A0A182MSS7 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.660 |
A0A182M1F5 | A0A182LYZ5 | PDZ domain-containing protein. | Uncharacterized protein. | 0.649 |
A0A182M1F5 | A0A182M529 | PDZ domain-containing protein. | Tudor domain-containing protein. | 0.987 |
A0A182M1F5 | A0A182MM60 | PDZ domain-containing protein. | Uncharacterized protein. | 0.720 |
A0A182M1F5 | A0A182MSS7 | PDZ domain-containing protein. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.999 |
A0A182M529 | A0A182M1F5 | Tudor domain-containing protein. | PDZ domain-containing protein. | 0.987 |
A0A182M529 | A0A182MM60 | Tudor domain-containing protein. | Uncharacterized protein. | 0.732 |
A0A182M529 | A0A182MSS7 | Tudor domain-containing protein. | Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. | 0.990 |
A0A182M6B1 | A0A182LS03 | ERCC4 domain-containing protein. | DNA polymerase. | 0.836 |
A0A182M6B1 | A0A182MM60 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.724 |
A0A182M8E0 | A0A182MEC6 | WD_REPEATS_REGION domain-containing protein. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.992 |
A0A182M8E0 | A0A182MM60 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.799 |
A0A182M8E0 | A0A182MM64 | WD_REPEATS_REGION domain-containing protein. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.908 |
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