Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182LRU3 | A0A182LTP9 | Uncharacterized protein. | Uncharacterized protein. | 0.925 |
A0A182LRU3 | A0A182M043 | Uncharacterized protein. | Uncharacterized protein. | 0.440 |
A0A182LRU3 | A0A182MQ32 | Uncharacterized protein. | Uncharacterized protein. | 0.440 |
A0A182LTP9 | A0A182LRU3 | Uncharacterized protein. | Uncharacterized protein. | 0.925 |
A0A182LTP9 | A0A182MQ32 | Uncharacterized protein. | Uncharacterized protein. | 0.411 |
A0A182LW11 | A0A182M043 | BH4_AAA_HYDROXYL_2 domain-containing protein. | Uncharacterized protein. | 0.443 |
A0A182LW11 | A0A182M173 | BH4_AAA_HYDROXYL_2 domain-containing protein. | Aspartate aminotransferase. | 0.957 |
A0A182LW11 | A0A182MB16 | BH4_AAA_HYDROXYL_2 domain-containing protein. | Aspartate aminotransferase. | 0.954 |
A0A182LW11 | A0A182MQ32 | BH4_AAA_HYDROXYL_2 domain-containing protein. | Uncharacterized protein. | 0.456 |
A0A182LW11 | A0A182MT00 | BH4_AAA_HYDROXYL_2 domain-containing protein. | Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. | 0.590 |
A0A182M043 | A0A182LRU3 | Uncharacterized protein. | Uncharacterized protein. | 0.440 |
A0A182M043 | A0A182LW11 | Uncharacterized protein. | BH4_AAA_HYDROXYL_2 domain-containing protein. | 0.443 |
A0A182M043 | A0A182M173 | Uncharacterized protein. | Aspartate aminotransferase. | 0.411 |
A0A182M043 | A0A182MB16 | Uncharacterized protein. | Aspartate aminotransferase. | 0.442 |
A0A182M043 | A0A182MQ32 | Uncharacterized protein. | Uncharacterized protein. | 0.677 |
A0A182M043 | A0A182MT00 | Uncharacterized protein. | Probable lysine-specific histone demethylase 1; Probable histone demethylase that specifically demethylates 'Lys-4' of histone H3, a specific tag for epigenetic transcriptional activation, thereby acting as a corepressor. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Demethylates both mono- and di-methylated 'Lys-4' of histone H3. | 0.426 |
A0A182M173 | A0A182LW11 | Aspartate aminotransferase. | BH4_AAA_HYDROXYL_2 domain-containing protein. | 0.957 |
A0A182M173 | A0A182M043 | Aspartate aminotransferase. | Uncharacterized protein. | 0.411 |
A0A182M173 | A0A182MB16 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.986 |
A0A182M173 | A0A182MQ32 | Aspartate aminotransferase. | Uncharacterized protein. | 0.411 |
page 1 of 2