Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182LRD5 | A0A182LUR6 | Histone H3; Belongs to the histone H3 family. | Histone H2B; Belongs to the histone H2B family. | 0.971 |
A0A182LRD5 | A0A182MC05 | Histone H3; Belongs to the histone H3 family. | WD_REPEATS_REGION domain-containing protein. | 0.922 |
A0A182LRD5 | A0A182MKS5 | Histone H3; Belongs to the histone H3 family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.979 |
A0A182LRD5 | A0A182MP34 | Histone H3; Belongs to the histone H3 family. | B30.2/SPRY domain-containing protein. | 0.907 |
A0A182LRD5 | A0A182MQX8 | Histone H3; Belongs to the histone H3 family. | Uncharacterized protein. | 0.705 |
A0A182LT94 | A0A182LUR6 | Histone H3; Belongs to the histone H3 family. | Histone H2B; Belongs to the histone H2B family. | 0.971 |
A0A182LT94 | A0A182MC05 | Histone H3; Belongs to the histone H3 family. | WD_REPEATS_REGION domain-containing protein. | 0.923 |
A0A182LT94 | A0A182MEN2 | Histone H3; Belongs to the histone H3 family. | Histone H3; Belongs to the histone H3 family. | 0.737 |
A0A182LT94 | A0A182MKS5 | Histone H3; Belongs to the histone H3 family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.979 |
A0A182LT94 | A0A182MP34 | Histone H3; Belongs to the histone H3 family. | B30.2/SPRY domain-containing protein. | 0.907 |
A0A182LT94 | A0A182MQX8 | Histone H3; Belongs to the histone H3 family. | Uncharacterized protein. | 0.705 |
A0A182LUR6 | A0A182LRD5 | Histone H2B; Belongs to the histone H2B family. | Histone H3; Belongs to the histone H3 family. | 0.971 |
A0A182LUR6 | A0A182LT94 | Histone H2B; Belongs to the histone H2B family. | Histone H3; Belongs to the histone H3 family. | 0.971 |
A0A182LUR6 | A0A182LWB1 | Histone H2B; Belongs to the histone H2B family. | Uncharacterized protein. | 0.943 |
A0A182LUR6 | A0A182M0S9 | Histone H2B; Belongs to the histone H2B family. | Histone domain-containing protein. | 0.956 |
A0A182LUR6 | A0A182MC05 | Histone H2B; Belongs to the histone H2B family. | WD_REPEATS_REGION domain-containing protein. | 0.829 |
A0A182LUR6 | A0A182MEN2 | Histone H2B; Belongs to the histone H2B family. | Histone H3; Belongs to the histone H3 family. | 0.971 |
A0A182LUR6 | A0A182MKS5 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.999 |
A0A182LUR6 | A0A182MP34 | Histone H2B; Belongs to the histone H2B family. | B30.2/SPRY domain-containing protein. | 0.797 |
A0A182LUR6 | A0A182MQX8 | Histone H2B; Belongs to the histone H2B family. | Uncharacterized protein. | 0.784 |
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