STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000633435_05062Unannotated protein. (478 aa)    
Predicted Functional Partners:
GCA_000633435_03087
Unannotated protein.
  
   
 0.763
GCA_000633435_01213
Unannotated protein.
  
    0.760
GCA_000633435_05463
Unannotated protein.
  
     0.722
GCA_000633435_03085
Unannotated protein.
  
     0.695
GCA_000633435_03318
Unannotated protein.
  
     0.677
GCA_000633435_06325
Unannotated protein.
  
     0.658
GCA_000633435_04414
Unannotated protein.
  
     0.638
GCA_000633435_00334
Unannotated protein.
  
   
 0.608
GCA_000633435_05063
Unannotated protein.
 
    
0.598
GCA_000633435_06468
Unannotated protein.
  
     0.572
Your Current Organism:
Achromobacter sp. DH1f
NCBI taxonomy Id: 1397275
Other names: A. sp. DH1f, Alcaligenes sp. DH1f
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.