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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AB434_0100Stage V sporulation protein involved in spore cortex synthesis (SpoVR). (469 aa)    
Predicted Functional Partners:
AB434_0114
Serine protein kinase (prkA protein), P-loop containing.
 
  
 0.988
AB434_0111
UPF0229 protein YeaH; Belongs to the UPF0229 family.
 
  
 0.949
AB434_0112
UPF0229 protein YeaH.
 
  
 0.949
AB434_0118
Hypothetical protein.
 
    0.569
AB434_0099
Hypothetical protein.
       0.561
AB434_2840
Outer spore coat protein E.
  
  
 0.501
AB434_2818
Hypothetical protein.
  
     0.442
AB434_0999
Hypothetical protein; Essential for the localization of CwlJ in the spore coat and for spore germination triggered by calcium and dipicolinic acid (DPA). Its assembly into the spore coat is dependent on the coat morphogenetic proteins CotE and SpoIVA.
  
    0.417
AB434_2549
Putative ATPase related to phosphate starvation-inducible protein PhoH.
   
    0.400
Your Current Organism:
Bacillus coagulans
NCBI taxonomy Id: 1398
Other names: ATCC 7050, B. coagulans, BCRC 10606, Bacillus sp. NCIM 2323, CCM 2013, CCRC 10606, CCRC:10606, CCUG 7417, CFBP 4225, CIP 66.25, DSM 1, IFO 12583, IMET 10993, JCM 2257, LMG 6326, LMG:6326, Lactobacillus sp. T4, NBRC 12583, NCAIM B.01086, NCCB 48014, NCCB 77025, NCIB 9365, NCIMB 9365, NCTC 10334, NRRL NRS-609, VKM B-731
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