Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_0164 | AB434_0165 | Hypothetical protein. | Hypothetical protein. | 0.746 |
AB434_0164 | AB434_0166 | Hypothetical protein. | OrfL2. | 0.746 |
AB434_0165 | AB434_0164 | Hypothetical protein. | Hypothetical protein. | 0.746 |
AB434_0165 | AB434_0166 | Hypothetical protein. | OrfL2. | 0.952 |
AB434_0165 | AB434_0303 | Hypothetical protein. | Cytochrome P450. | 0.616 |
AB434_0165 | AB434_1974 | Hypothetical protein. | Hypothetical protein. | 0.505 |
AB434_0165 | AB434_2918 | Hypothetical protein. | Metallo-beta-lactamase family protein. | 0.437 |
AB434_0165 | AB434_3699 | Hypothetical protein. | Hypothetical protein. | 0.474 |
AB434_0165 | AB434_3701 | Hypothetical protein. | Spore coat protein F. | 0.493 |
AB434_0165 | AB434_3702 | Hypothetical protein. | Spore coat protein F. | 0.550 |
AB434_0166 | AB434_0164 | OrfL2. | Hypothetical protein. | 0.746 |
AB434_0166 | AB434_0165 | OrfL2. | Hypothetical protein. | 0.952 |
AB434_0166 | AB434_0303 | OrfL2. | Cytochrome P450. | 0.646 |
AB434_0166 | AB434_1974 | OrfL2. | Hypothetical protein. | 0.513 |
AB434_0166 | AB434_2918 | OrfL2. | Metallo-beta-lactamase family protein. | 0.574 |
AB434_0166 | AB434_3162 | OrfL2. | Catalase. | 0.429 |
AB434_0166 | AB434_3699 | OrfL2. | Hypothetical protein. | 0.477 |
AB434_0166 | AB434_3701 | OrfL2. | Spore coat protein F. | 0.505 |
AB434_0166 | AB434_3702 | OrfL2. | Spore coat protein F. | 0.548 |
AB434_0166 | AB434_3953 | OrfL2. | Ferredoxin. | 0.452 |
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