Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_0256 | AB434_0257 | Hypothetical protein. | Hypothetical protein. | 0.538 |
AB434_0257 | AB434_0256 | Hypothetical protein. | Hypothetical protein. | 0.538 |
AB434_0257 | AB434_0833 | Hypothetical protein. | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | 0.744 |
AB434_0257 | AB434_1412 | Hypothetical protein. | Drug resistance transporter. | 0.651 |
AB434_0257 | AB434_2063 | Hypothetical protein. | Drug resistance transporter, EmrB/QacA family; Belongs to the major facilitator superfamily. | 0.605 |
AB434_0257 | AB434_2652 | Hypothetical protein. | Drug resistance transporter, EmrB/QacA family; Belongs to the major facilitator superfamily. | 0.617 |
AB434_0257 | AB434_2977 | Hypothetical protein. | Hypothetical protein. | 0.688 |
AB434_0257 | AB434_3612 | Hypothetical protein. | Multidrug resistance protein. | 0.422 |
AB434_0833 | AB434_0257 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Hypothetical protein. | 0.744 |
AB434_0833 | AB434_3612 | Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily. | Multidrug resistance protein. | 0.547 |
AB434_1412 | AB434_0257 | Drug resistance transporter. | Hypothetical protein. | 0.651 |
AB434_1412 | AB434_2652 | Drug resistance transporter. | Drug resistance transporter, EmrB/QacA family; Belongs to the major facilitator superfamily. | 0.713 |
AB434_1412 | AB434_3612 | Drug resistance transporter. | Multidrug resistance protein. | 0.527 |
AB434_2063 | AB434_0257 | Drug resistance transporter, EmrB/QacA family; Belongs to the major facilitator superfamily. | Hypothetical protein. | 0.605 |
AB434_2063 | AB434_3612 | Drug resistance transporter, EmrB/QacA family; Belongs to the major facilitator superfamily. | Multidrug resistance protein. | 0.589 |
AB434_2652 | AB434_0257 | Drug resistance transporter, EmrB/QacA family; Belongs to the major facilitator superfamily. | Hypothetical protein. | 0.617 |
AB434_2652 | AB434_1412 | Drug resistance transporter, EmrB/QacA family; Belongs to the major facilitator superfamily. | Drug resistance transporter. | 0.713 |
AB434_2652 | AB434_3612 | Drug resistance transporter, EmrB/QacA family; Belongs to the major facilitator superfamily. | Multidrug resistance protein. | 0.519 |
AB434_2977 | AB434_0257 | Hypothetical protein. | Hypothetical protein. | 0.688 |
AB434_2977 | AB434_3612 | Hypothetical protein. | Multidrug resistance protein. | 0.509 |
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