Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AB434_0192 | AB434_0194 | AB434_0192 | AB434_0194 | Alkanesulfonates-binding protein. | Alkanesulfonates ABC transporter ATP-binding protein. | 0.992 |
AB434_0192 | AB434_0633 | AB434_0192 | AB434_0633 | Alkanesulfonates-binding protein. | FMN reductase. | 0.881 |
AB434_0192 | AB434_0635 | AB434_0192 | AB434_0635 | Alkanesulfonates-binding protein. | Alkanesulfonates transport system permease protein. | 0.871 |
AB434_0192 | AB434_0637 | AB434_0192 | AB434_0637 | Alkanesulfonates-binding protein. | Alkanesulfonates-binding protein. | 0.905 |
AB434_0192 | AB434_1968 | AB434_0192 | AB434_1968 | Alkanesulfonates-binding protein. | Hydroxymethylpyrimidine ABC transporter, ATPase component. | 0.572 |
AB434_0192 | AB434_2656 | AB434_0192 | AB434_2656 | Alkanesulfonates-binding protein. | ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component. | 0.677 |
AB434_0192 | AB434_2657 | AB434_0192 | AB434_2657 | Alkanesulfonates-binding protein. | Taurine-binding periplasmic protein TauA. | 0.402 |
AB434_0192 | AB434_3919 | AB434_0192 | AB434_3919 | Alkanesulfonates-binding protein. | Hydroxymethylpyrimidine ABC transporter, ATPase component. | 0.544 |
AB434_0192 | ssuB | AB434_0192 | AB434_0634 | Alkanesulfonates-binding protein. | Alkanesulfonates ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.986 |
AB434_0192 | ssuD | AB434_0192 | AB434_0636 | Alkanesulfonates-binding protein. | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.942 |
AB434_0194 | AB434_0192 | AB434_0194 | AB434_0192 | Alkanesulfonates ABC transporter ATP-binding protein. | Alkanesulfonates-binding protein. | 0.992 |
AB434_0194 | AB434_0633 | AB434_0194 | AB434_0633 | Alkanesulfonates ABC transporter ATP-binding protein. | FMN reductase. | 0.791 |
AB434_0194 | AB434_0635 | AB434_0194 | AB434_0635 | Alkanesulfonates ABC transporter ATP-binding protein. | Alkanesulfonates transport system permease protein. | 0.760 |
AB434_0194 | AB434_0637 | AB434_0194 | AB434_0637 | Alkanesulfonates ABC transporter ATP-binding protein. | Alkanesulfonates-binding protein. | 0.974 |
AB434_0194 | AB434_2657 | AB434_0194 | AB434_2657 | Alkanesulfonates ABC transporter ATP-binding protein. | Taurine-binding periplasmic protein TauA. | 0.673 |
AB434_0194 | ssuB | AB434_0194 | AB434_0634 | Alkanesulfonates ABC transporter ATP-binding protein. | Alkanesulfonates ABC transporter ATP-binding protein; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system. | 0.902 |
AB434_0194 | ssuD | AB434_0194 | AB434_0636 | Alkanesulfonates ABC transporter ATP-binding protein. | Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family. | 0.875 |
AB434_0633 | AB434_0192 | AB434_0633 | AB434_0192 | FMN reductase. | Alkanesulfonates-binding protein. | 0.881 |
AB434_0633 | AB434_0194 | AB434_0633 | AB434_0194 | FMN reductase. | Alkanesulfonates ABC transporter ATP-binding protein. | 0.791 |
AB434_0633 | AB434_0635 | AB434_0633 | AB434_0635 | FMN reductase. | Alkanesulfonates transport system permease protein. | 0.861 |
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