Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_0789 | AB434_0790 | Hypothetical protein. | Hypothetical protein. | 0.636 |
AB434_0789 | AB434_0791 | Hypothetical protein. | Salicylate hydroxylase. | 0.574 |
AB434_0789 | AB434_0792 | Hypothetical protein. | 4-hydroxybenzoyl-CoA thioesterase family. | 0.545 |
AB434_0789 | AB434_0793 | Hypothetical protein. | Long-chain-fatty-acid--CoA ligase. | 0.545 |
AB434_0789 | AB434_0794 | Hypothetical protein. | Hypothetical protein. | 0.545 |
AB434_0790 | AB434_0789 | Hypothetical protein. | Hypothetical protein. | 0.636 |
AB434_0790 | AB434_0791 | Hypothetical protein. | Salicylate hydroxylase. | 0.704 |
AB434_0790 | AB434_0792 | Hypothetical protein. | 4-hydroxybenzoyl-CoA thioesterase family. | 0.659 |
AB434_0790 | AB434_0793 | Hypothetical protein. | Long-chain-fatty-acid--CoA ligase. | 0.659 |
AB434_0790 | AB434_0794 | Hypothetical protein. | Hypothetical protein. | 0.657 |
AB434_0790 | AB434_0795 | Hypothetical protein. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.460 |
AB434_0790 | AB434_0796 | Hypothetical protein. | 3-hydroxybutyryl-CoA dehydratase. | 0.460 |
AB434_0790 | AB434_0797 | Hypothetical protein. | 3-hydroxybutyryl-CoA dehydratase. | 0.460 |
AB434_0790 | AB434_0798 | Hypothetical protein. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.454 |
AB434_0791 | AB434_0789 | Salicylate hydroxylase. | Hypothetical protein. | 0.574 |
AB434_0791 | AB434_0790 | Salicylate hydroxylase. | Hypothetical protein. | 0.704 |
AB434_0791 | AB434_0792 | Salicylate hydroxylase. | 4-hydroxybenzoyl-CoA thioesterase family. | 0.805 |
AB434_0791 | AB434_0793 | Salicylate hydroxylase. | Long-chain-fatty-acid--CoA ligase. | 0.783 |
AB434_0791 | AB434_0794 | Salicylate hydroxylase. | Hypothetical protein. | 0.732 |
AB434_0791 | AB434_0795 | Salicylate hydroxylase. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.555 |
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