Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AB434_1073ABC-type amino acid transport system, permease component. (229 aa)    
Predicted Functional Partners:
AB434_1072
Amino-acid ABC transporter ATP-binding protein.
 
 
 0.978
AB434_0666
Amino acid ABC transporter, amino acid-binding protein.
 
 0.966
AB434_1071
Glutamine ABC transporter substrate-binding protein.
 
 
 0.953
AB434_1074
ABC transporter membrane-spanning permease - glutamine transport.
 
  
 
0.898
AB434_1645
Glutamate transport ATP-binding protein.
 
 
 0.857
AB434_1064
Glutamine transport ATP-binding protein GlnQ.
 
 
 0.851
AB434_0128
Histidine ABC transporter, ATP-binding protein HisP.
 
 
 0.847
AB434_0664
Glutamine transport ATP-binding protein GlnQ.
 
 
 0.840
AB434_0530
L-Cystine ABC transporter, ATP-binding protein TcyN.
 
 
 0.836
AB434_1648
Glutamine ABC transporter, periplasmic glutamine-binding protein.
 
 
 0.771
Your Current Organism:
Bacillus coagulans
NCBI taxonomy Id: 1398
Other names: ATCC 7050, B. coagulans, BCRC 10606, Bacillus sp. NCIM 2323, CCM 2013, CCRC 10606, CCRC:10606, CCUG 7417, CFBP 4225, CIP 66.25, DSM 1, IFO 12583, IMET 10993, JCM 2257, LMG 6326, LMG:6326, Lactobacillus sp. T4, NBRC 12583, NCAIM B.01086, NCCB 48014, NCCB 77025, NCIB 9365, NCIMB 9365, NCTC 10334, NRRL NRS-609, VKM B-731
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