Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AB434_1194 | AB434_1195 | AB434_1194 | AB434_1195 | Nucleoside triphosphate pyrophosphohydrolase MazG. | S4-domain-containing heat shock protein. | 0.876 |
AB434_1195 | AB434_1194 | AB434_1195 | AB434_1194 | S4-domain-containing heat shock protein. | Nucleoside triphosphate pyrophosphohydrolase MazG. | 0.876 |
AB434_1195 | AB434_2675 | AB434_1195 | AB434_2675 | S4-domain-containing heat shock protein. | Fibronectin/fibrinogen-binding protein. | 0.886 |
AB434_1195 | AB434_2692 | AB434_1195 | AB434_2692 | S4-domain-containing heat shock protein. | LSU ribosomal protein L28p. | 0.809 |
AB434_1195 | hslO | AB434_1195 | AB434_1210 | S4-domain-containing heat shock protein. | Chaperonin (heat shock protein 33); Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress. | 0.841 |
AB434_1195 | rplQ | AB434_1195 | AB434_1300 | S4-domain-containing heat shock protein. | LSU ribosomal protein L17p. | 0.819 |
AB434_1195 | rplS | AB434_1195 | AB434_2717 | S4-domain-containing heat shock protein. | LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.858 |
AB434_1195 | rplT | AB434_1195 | AB434_3766 | S4-domain-containing heat shock protein. | LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.790 |
AB434_1195 | rplU | AB434_1195 | AB434_3641 | S4-domain-containing heat shock protein. | LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.784 |
AB434_1195 | rpmA | AB434_1195 | AB434_3639 | S4-domain-containing heat shock protein. | LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family. | 0.784 |
AB434_1195 | rpmH | AB434_1195 | AB434_1143 | S4-domain-containing heat shock protein. | LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family. | 0.804 |
AB434_2675 | AB434_1195 | AB434_2675 | AB434_1195 | Fibronectin/fibrinogen-binding protein. | S4-domain-containing heat shock protein. | 0.886 |
AB434_2675 | AB434_2692 | AB434_2675 | AB434_2692 | Fibronectin/fibrinogen-binding protein. | LSU ribosomal protein L28p. | 0.613 |
AB434_2675 | hslO | AB434_2675 | AB434_1210 | Fibronectin/fibrinogen-binding protein. | Chaperonin (heat shock protein 33); Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress. | 0.439 |
AB434_2675 | rplQ | AB434_2675 | AB434_1300 | Fibronectin/fibrinogen-binding protein. | LSU ribosomal protein L17p. | 0.555 |
AB434_2675 | rplS | AB434_2675 | AB434_2717 | Fibronectin/fibrinogen-binding protein. | LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.773 |
AB434_2675 | rplT | AB434_2675 | AB434_3766 | Fibronectin/fibrinogen-binding protein. | LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.555 |
AB434_2675 | rplU | AB434_2675 | AB434_3641 | Fibronectin/fibrinogen-binding protein. | LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.555 |
AB434_2675 | rpmA | AB434_2675 | AB434_3639 | Fibronectin/fibrinogen-binding protein. | LSU ribosomal protein L27p; Belongs to the bacterial ribosomal protein bL27 family. | 0.555 |
AB434_2675 | rpmH | AB434_2675 | AB434_1143 | Fibronectin/fibrinogen-binding protein. | LSU ribosomal protein L34p; Belongs to the bacterial ribosomal protein bL34 family. | 0.555 |
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