STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potAPutrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. (366 aa)    
Predicted Functional Partners:
AB434_1584
Spermidine Putrescine ABC transporter permease component PotB.
 
 0.999
AB434_1586
ABC transporter, periplasmic spermidine putrescine-binding protein PotD.
 
 
 0.997
AB434_1585
Spermidine Putrescine ABC transporter permease component potC.
 
 
 0.994
AB434_1582
Transcriptional regulator, MerR family, near polyamine transporter.
 
 
 0.832
AB434_3850
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.652
AB434_1581
Hypothetical protein.
       0.489
AB434_3533
Late competence protein ComEC, DNA transport.
  
  
 0.453
AB434_0810
ABC-type multidrug transport system, ATPase component.
 
     
0.447
AB434_0892
Maltose/maltodextrin ABC transporter, permease protein MalF.
    
 0.441
AB434_0090
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
   
 
 0.413
Your Current Organism:
Bacillus coagulans
NCBI taxonomy Id: 1398
Other names: ATCC 7050, B. coagulans, BCRC 10606, Bacillus sp. NCIM 2323, CCM 2013, CCRC 10606, CCRC:10606, CCUG 7417, CFBP 4225, CIP 66.25, DSM 1, IFO 12583, IMET 10993, JCM 2257, LMG 6326, LMG:6326, Lactobacillus sp. T4, NBRC 12583, NCAIM B.01086, NCCB 48014, NCCB 77025, NCIB 9365, NCIMB 9365, NCTC 10334, NRRL NRS-609, VKM B-731
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