Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_1749 | AB434_1750 | Glucosamine--fructose-6-phosphate aminotransferase. | Putative galactitol operon regulator. | 0.476 |
AB434_1749 | AB434_1751 | Glucosamine--fructose-6-phosphate aminotransferase. | PTS system, galactitol-specific IIA component. | 0.580 |
AB434_1749 | AB434_1752 | Glucosamine--fructose-6-phosphate aminotransferase. | PTS system, galactitol-specific IIB component. | 0.570 |
AB434_1749 | AB434_1753 | Glucosamine--fructose-6-phosphate aminotransferase. | PTS system, galactitol-specific IIC component. | 0.510 |
AB434_1749 | AB434_1754 | Glucosamine--fructose-6-phosphate aminotransferase. | Hypothetical protein. | 0.411 |
AB434_1749 | AB434_1755 | Glucosamine--fructose-6-phosphate aminotransferase. | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.434 |
AB434_1749 | AB434_1756 | Glucosamine--fructose-6-phosphate aminotransferase. | Class II aldolase/adducin domain protein. | 0.435 |
AB434_1750 | AB434_1749 | Putative galactitol operon regulator. | Glucosamine--fructose-6-phosphate aminotransferase. | 0.476 |
AB434_1750 | AB434_1751 | Putative galactitol operon regulator. | PTS system, galactitol-specific IIA component. | 0.952 |
AB434_1750 | AB434_1752 | Putative galactitol operon regulator. | PTS system, galactitol-specific IIB component. | 0.972 |
AB434_1750 | AB434_1753 | Putative galactitol operon regulator. | PTS system, galactitol-specific IIC component. | 0.954 |
AB434_1750 | AB434_1754 | Putative galactitol operon regulator. | Hypothetical protein. | 0.687 |
AB434_1750 | AB434_1755 | Putative galactitol operon regulator. | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.900 |
AB434_1750 | AB434_1756 | Putative galactitol operon regulator. | Class II aldolase/adducin domain protein. | 0.911 |
AB434_1751 | AB434_1749 | PTS system, galactitol-specific IIA component. | Glucosamine--fructose-6-phosphate aminotransferase. | 0.580 |
AB434_1751 | AB434_1750 | PTS system, galactitol-specific IIA component. | Putative galactitol operon regulator. | 0.952 |
AB434_1751 | AB434_1752 | PTS system, galactitol-specific IIA component. | PTS system, galactitol-specific IIB component. | 0.964 |
AB434_1751 | AB434_1753 | PTS system, galactitol-specific IIA component. | PTS system, galactitol-specific IIC component. | 0.959 |
AB434_1751 | AB434_1754 | PTS system, galactitol-specific IIA component. | Hypothetical protein. | 0.686 |
AB434_1751 | AB434_1755 | PTS system, galactitol-specific IIA component. | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.825 |
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