Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_1740 | AB434_1741 | N-methylhydantoinase A. | N-methylhydantoinase B. | 0.999 |
AB434_1740 | AB434_1742 | N-methylhydantoinase A. | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | 0.831 |
AB434_1740 | AB434_1758 | N-methylhydantoinase A. | Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization. | 0.535 |
AB434_1740 | AB434_1761 | N-methylhydantoinase A. | Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization. | 0.540 |
AB434_1741 | AB434_1740 | N-methylhydantoinase B. | N-methylhydantoinase A. | 0.999 |
AB434_1741 | AB434_1742 | N-methylhydantoinase B. | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | 0.840 |
AB434_1741 | AB434_1758 | N-methylhydantoinase B. | Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization. | 0.410 |
AB434_1741 | AB434_1759 | N-methylhydantoinase B. | N-methylhydantoinase (ATP-hydrolyzing). | 0.916 |
AB434_1741 | AB434_1761 | N-methylhydantoinase B. | Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization. | 0.406 |
AB434_1741 | AB434_1762 | N-methylhydantoinase B. | N-methylhydantoinase (ATP-hydrolyzing). | 0.918 |
AB434_1742 | AB434_1740 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | N-methylhydantoinase A. | 0.831 |
AB434_1742 | AB434_1741 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | N-methylhydantoinase B. | 0.840 |
AB434_1742 | AB434_1758 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization. | 0.699 |
AB434_1742 | AB434_1759 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | N-methylhydantoinase (ATP-hydrolyzing). | 0.709 |
AB434_1742 | AB434_1761 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization. | 0.719 |
AB434_1742 | AB434_1762 | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | N-methylhydantoinase (ATP-hydrolyzing). | 0.710 |
AB434_1758 | AB434_1740 | Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization. | N-methylhydantoinase A. | 0.535 |
AB434_1758 | AB434_1741 | Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization. | N-methylhydantoinase B. | 0.410 |
AB434_1758 | AB434_1742 | Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization. | Cytosine/purine/uracil/thiamine/allantoin permease family protein. | 0.699 |
AB434_1758 | AB434_1759 | Conservative hypothetical protein probably involved in hydantoin, pyrimidine utilization. | N-methylhydantoinase (ATP-hydrolyzing). | 0.963 |
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