Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_1773 | AB434_1774 | Amino acid transporter. | Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M. | 0.425 |
AB434_1774 | AB434_1773 | Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M. | Amino acid transporter. | 0.425 |
AB434_1774 | AB434_1917 | Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M. | N-acetylmannosaminyltransferase; Belongs to the glycosyltransferase 26 family. | 0.492 |
AB434_1774 | AB434_2099 | Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M. | Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | 0.405 |
AB434_1774 | AB434_3535 | Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M. | Late competence protein ComEA, DNA receptor. | 0.462 |
AB434_1917 | AB434_1774 | N-acetylmannosaminyltransferase; Belongs to the glycosyltransferase 26 family. | Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M. | 0.492 |
AB434_1917 | AB434_2099 | N-acetylmannosaminyltransferase; Belongs to the glycosyltransferase 26 family. | Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | 0.849 |
AB434_2099 | AB434_1774 | Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M. | 0.405 |
AB434_2099 | AB434_1917 | Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase. | N-acetylmannosaminyltransferase; Belongs to the glycosyltransferase 26 family. | 0.849 |
AB434_3535 | AB434_1774 | Late competence protein ComEA, DNA receptor. | Cell envelope-associated transcriptional attenuator LytR-CpsA-Psr, subfamily M. | 0.462 |