Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_1196 | AB434_1197 | Forespore shell protein. | Spore cortex biosynthesis protein. | 0.966 |
AB434_1196 | AB434_1996 | Forespore shell protein. | Stage V sporulation protein B. | 0.539 |
AB434_1196 | AB434_3511 | Forespore shell protein. | Stage IV sporulation protein. | 0.827 |
AB434_1197 | AB434_1196 | Spore cortex biosynthesis protein. | Forespore shell protein. | 0.966 |
AB434_1197 | AB434_1996 | Spore cortex biosynthesis protein. | Stage V sporulation protein B. | 0.524 |
AB434_1197 | AB434_2249 | Spore cortex biosynthesis protein. | Hypothetical protein. | 0.624 |
AB434_1197 | AB434_3177 | Spore cortex biosynthesis protein. | Hypothetical protein. | 0.616 |
AB434_1197 | AB434_3451 | Spore cortex biosynthesis protein. | Putative protein YqhG. | 0.756 |
AB434_1197 | AB434_3511 | Spore cortex biosynthesis protein. | Stage IV sporulation protein. | 0.625 |
AB434_1197 | AB434_3671 | Spore cortex biosynthesis protein. | CotS-related protein. | 0.728 |
AB434_1197 | AB434_3672 | Spore cortex biosynthesis protein. | Stage VI sporulation protein D. | 0.771 |
AB434_1197 | AB434_3813 | Spore cortex biosynthesis protein. | Putative secreted protein. | 0.671 |
AB434_1995 | AB434_1996 | Aminoglycoside N3-acetyltransferase. | Stage V sporulation protein B. | 0.560 |
AB434_1996 | AB434_1196 | Stage V sporulation protein B. | Forespore shell protein. | 0.539 |
AB434_1996 | AB434_1197 | Stage V sporulation protein B. | Spore cortex biosynthesis protein. | 0.524 |
AB434_1996 | AB434_1995 | Stage V sporulation protein B. | Aminoglycoside N3-acetyltransferase. | 0.560 |
AB434_1996 | AB434_2249 | Stage V sporulation protein B. | Hypothetical protein. | 0.561 |
AB434_1996 | AB434_3177 | Stage V sporulation protein B. | Hypothetical protein. | 0.602 |
AB434_1996 | AB434_3451 | Stage V sporulation protein B. | Putative protein YqhG. | 0.551 |
AB434_1996 | AB434_3511 | Stage V sporulation protein B. | Stage IV sporulation protein. | 0.621 |
page 1 of 4