Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AB434_2016Hypothetical protein. (319 aa)    
Predicted Functional Partners:
AB434_2014
SAM-dependent methyltransferase.
       0.615
AB434_2015
SAM-dependent methyltransferase.
       0.615
AB434_2021
Oxidoreductase of aldo/keto reductase family, subgroup 1.
 
 
0.541
AB434_4005
Oxidoreductase of aldo/keto reductase family, subgroup 1.
 
 
0.541
AB434_4006
Oxidoreductase of aldo/keto reductase family, subgroup 1.
 
 
0.534
AB434_2013
Putative esterase/lipase.
 
     0.447
AB434_3856
NAD-independent protein deacetylase AcuC.
   
  0.428
AB434_2017
Coat F.
       0.402
AB434_2018
Coat F.
       0.402
Your Current Organism:
Bacillus coagulans
NCBI taxonomy Id: 1398
Other names: ATCC 7050, B. coagulans, BCRC 10606, Bacillus sp. NCIM 2323, CCM 2013, CCRC 10606, CCRC:10606, CCUG 7417, CFBP 4225, CIP 66.25, DSM 1, IFO 12583, IMET 10993, JCM 2257, LMG 6326, LMG:6326, Lactobacillus sp. T4, NBRC 12583, NCAIM B.01086, NCCB 48014, NCCB 77025, NCIB 9365, NCIMB 9365, NCTC 10334, NRRL NRS-609, VKM B-731
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.