Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_2171 | AB434_2172 | 4Fe-4S ferredoxin. | Hypothetical protein. | 0.532 |
AB434_2171 | AB434_2173 | 4Fe-4S ferredoxin. | Hypothetical protein. | 0.417 |
AB434_2172 | AB434_2171 | Hypothetical protein. | 4Fe-4S ferredoxin. | 0.532 |
AB434_2172 | AB434_2173 | Hypothetical protein. | Hypothetical protein. | 0.588 |
AB434_2172 | AB434_2174 | Hypothetical protein. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.508 |
AB434_2172 | AB434_2175 | Hypothetical protein. | Phosphate regulon sensor protein PhoR (SphS). | 0.478 |
AB434_2173 | AB434_2171 | Hypothetical protein. | 4Fe-4S ferredoxin. | 0.417 |
AB434_2173 | AB434_2172 | Hypothetical protein. | Hypothetical protein. | 0.588 |
AB434_2173 | AB434_2174 | Hypothetical protein. | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.661 |
AB434_2173 | AB434_2175 | Hypothetical protein. | Phosphate regulon sensor protein PhoR (SphS). | 0.619 |
AB434_2174 | AB434_2172 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Hypothetical protein. | 0.508 |
AB434_2174 | AB434_2173 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Hypothetical protein. | 0.661 |
AB434_2174 | AB434_2175 | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | Phosphate regulon sensor protein PhoR (SphS). | 0.994 |
AB434_2175 | AB434_2172 | Phosphate regulon sensor protein PhoR (SphS). | Hypothetical protein. | 0.478 |
AB434_2175 | AB434_2173 | Phosphate regulon sensor protein PhoR (SphS). | Hypothetical protein. | 0.619 |
AB434_2175 | AB434_2174 | Phosphate regulon sensor protein PhoR (SphS). | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP. | 0.994 |