Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_0097 | AB434_2297 | Hypothetical protein. | Protein GerPF. | 0.665 |
AB434_0097 | AB434_2299 | Hypothetical protein. | Hypothetical protein. | 0.490 |
AB434_0097 | AB434_2300 | Hypothetical protein. | Protein GerPC. | 0.747 |
AB434_0097 | AB434_2302 | Hypothetical protein. | Spore germination protein. | 0.729 |
AB434_0097 | AB434_2303 | Hypothetical protein. | Protein GerPA. | 0.629 |
AB434_0097 | AB434_3328 | Hypothetical protein. | CAAX amino terminal protease family protein. | 0.407 |
AB434_0097 | AB434_3362 | Hypothetical protein. | Hypothetical protein. | 0.770 |
AB434_0097 | AB434_3428 | Hypothetical protein. | Hypothetical protein. | 0.605 |
AB434_0097 | AB434_3484 | Hypothetical protein. | Hypothetical protein. | 0.773 |
AB434_0097 | AB434_3883 | Hypothetical protein. | Hypothetical protein. | 0.774 |
AB434_2297 | AB434_0097 | Protein GerPF. | Hypothetical protein. | 0.665 |
AB434_2297 | AB434_2299 | Protein GerPF. | Hypothetical protein. | 0.943 |
AB434_2297 | AB434_2300 | Protein GerPF. | Protein GerPC. | 0.936 |
AB434_2297 | AB434_2302 | Protein GerPF. | Spore germination protein. | 0.899 |
AB434_2297 | AB434_2303 | Protein GerPF. | Protein GerPA. | 0.881 |
AB434_2297 | AB434_3328 | Protein GerPF. | CAAX amino terminal protease family protein. | 0.601 |
AB434_2297 | AB434_3362 | Protein GerPF. | Hypothetical protein. | 0.614 |
AB434_2297 | AB434_3428 | Protein GerPF. | Hypothetical protein. | 0.538 |
AB434_2297 | AB434_3484 | Protein GerPF. | Hypothetical protein. | 0.649 |
AB434_2297 | AB434_3883 | Protein GerPF. | Hypothetical protein. | 0.682 |
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