Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AB434_0644 | AB434_1608 | AB434_0644 | AB434_1608 | Pyrimidine-nucleoside phosphorylase. | Dihydropyrimidine dehydrogenase. | 0.916 |
AB434_0644 | pyrR | AB434_0644 | AB434_2626 | Pyrimidine-nucleoside phosphorylase. | Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.916 |
AB434_0644 | udk | AB434_0644 | AB434_3577 | Pyrimidine-nucleoside phosphorylase. | Uridine kinase. | 0.924 |
AB434_0644 | upp | AB434_0644 | AB434_0939 | Pyrimidine-nucleoside phosphorylase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.952 |
AB434_1047 | AB434_1608 | AB434_1047 | AB434_1608 | Uracil permease. | Dihydropyrimidine dehydrogenase. | 0.524 |
AB434_1047 | pyrB | AB434_1047 | AB434_2629 | Uracil permease. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.973 |
AB434_1047 | pyrC | AB434_1047 | AB434_2630 | Uracil permease. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.950 |
AB434_1047 | pyrE | AB434_1047 | AB434_2636 | Uracil permease. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.900 |
AB434_1047 | pyrF | AB434_1047 | AB434_2635 | Uracil permease. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.905 |
AB434_1047 | pyrR | AB434_1047 | AB434_2626 | Uracil permease. | Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.952 |
AB434_1047 | upp | AB434_1047 | AB434_0939 | Uracil permease. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.508 |
AB434_1608 | AB434_0644 | AB434_1608 | AB434_0644 | Dihydropyrimidine dehydrogenase. | Pyrimidine-nucleoside phosphorylase. | 0.916 |
AB434_1608 | AB434_1047 | AB434_1608 | AB434_1047 | Dihydropyrimidine dehydrogenase. | Uracil permease. | 0.524 |
AB434_1608 | pyrB | AB434_1608 | AB434_2629 | Dihydropyrimidine dehydrogenase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.808 |
AB434_1608 | pyrC | AB434_1608 | AB434_2630 | Dihydropyrimidine dehydrogenase. | Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.712 |
AB434_1608 | pyrE | AB434_1608 | AB434_2636 | Dihydropyrimidine dehydrogenase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.835 |
AB434_1608 | pyrF | AB434_1608 | AB434_2635 | Dihydropyrimidine dehydrogenase. | Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.791 |
AB434_1608 | pyrR | AB434_1608 | AB434_2626 | Dihydropyrimidine dehydrogenase. | Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily. | 0.954 |
AB434_1608 | udk | AB434_1608 | AB434_3577 | Dihydropyrimidine dehydrogenase. | Uridine kinase. | 0.465 |
AB434_1608 | upp | AB434_1608 | AB434_0939 | Dihydropyrimidine dehydrogenase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.926 |
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