Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AB434_0419 | AB434_1530 | AB434_0419 | AB434_1530 | Glycerol dehydrogenase. | Glycerol dehydrogenase. | 0.905 |
AB434_0419 | ldh | AB434_0419 | AB434_1943 | Glycerol dehydrogenase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.586 |
AB434_0419 | mgsA | AB434_0419 | AB434_2647 | Glycerol dehydrogenase. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.913 |
AB434_1530 | AB434_0419 | AB434_1530 | AB434_0419 | Glycerol dehydrogenase. | Glycerol dehydrogenase. | 0.905 |
AB434_1530 | ldh | AB434_1530 | AB434_1943 | Glycerol dehydrogenase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.586 |
AB434_1530 | mgsA | AB434_1530 | AB434_2647 | Glycerol dehydrogenase. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.913 |
AB434_3095 | ldh | AB434_3095 | AB434_1943 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.917 |
AB434_3095 | mgsA | AB434_3095 | AB434_2647 | L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.814 |
AB434_3272 | AB434_3273 | AB434_3272 | AB434_3273 | Glycosyl transferase, group 1 family protein. | Lmbe-related protein. | 0.975 |
AB434_3272 | birA | AB434_3272 | AB434_3270 | Glycosyl transferase, group 1 family protein. | Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.884 |
AB434_3272 | cca | AB434_3272 | AB434_3271 | Glycosyl transferase, group 1 family protein. | tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | 0.954 |
AB434_3272 | dapB | AB434_3272 | AB434_3274 | Glycosyl transferase, group 1 family protein. | 4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.851 |
AB434_3272 | mgsA | AB434_3272 | AB434_2647 | Glycosyl transferase, group 1 family protein. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.649 |
AB434_3273 | AB434_3272 | AB434_3273 | AB434_3272 | Lmbe-related protein. | Glycosyl transferase, group 1 family protein. | 0.975 |
AB434_3273 | birA | AB434_3273 | AB434_3270 | Lmbe-related protein. | Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | 0.841 |
AB434_3273 | cca | AB434_3273 | AB434_3271 | Lmbe-related protein. | tRNA nucleotidyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. | 0.943 |
AB434_3273 | dapB | AB434_3273 | AB434_3274 | Lmbe-related protein. | 4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. | 0.879 |
AB434_3273 | mgsA | AB434_3273 | AB434_2647 | Lmbe-related protein. | Methylglyoxal synthase; Catalyzes the formation of methylglyoxal from dihydroxyacetone phosphate. | 0.750 |
birA | AB434_3272 | AB434_3270 | AB434_3272 | Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Glycosyl transferase, group 1 family protein. | 0.884 |
birA | AB434_3273 | AB434_3270 | AB434_3273 | Biotin--protein ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family. | Lmbe-related protein. | 0.841 |
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