Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AB434_1430 | AB434_2659 | AB434_1430 | AB434_2659 | GCN5-related N-acetyltransferase. | Streptothricin acetyltransferase. | 0.427 |
AB434_2000 | AB434_2659 | AB434_2000 | AB434_2659 | Thioredoxin-like oxidoreductase. | Streptothricin acetyltransferase. | 0.449 |
AB434_2659 | AB434_1430 | AB434_2659 | AB434_1430 | Streptothricin acetyltransferase. | GCN5-related N-acetyltransferase. | 0.427 |
AB434_2659 | AB434_2000 | AB434_2659 | AB434_2000 | Streptothricin acetyltransferase. | Thioredoxin-like oxidoreductase. | 0.449 |
AB434_2659 | AB434_2660 | AB434_2659 | AB434_2660 | Streptothricin acetyltransferase. | Permease. | 0.459 |
AB434_2659 | AB434_2764 | AB434_2659 | AB434_2764 | Streptothricin acetyltransferase. | Chemotaxis protein CheC -- inhibitor of MCP methylation. | 0.410 |
AB434_2659 | AB434_3750 | AB434_2659 | AB434_3750 | Streptothricin acetyltransferase. | Antibiotic biosynthesis monooxygenase domain-containing protein. | 0.671 |
AB434_2659 | guaA | AB434_2659 | AB434_0836 | Streptothricin acetyltransferase. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.421 |
AB434_2660 | AB434_2659 | AB434_2660 | AB434_2659 | Permease. | Streptothricin acetyltransferase. | 0.459 |
AB434_2764 | AB434_2659 | AB434_2764 | AB434_2659 | Chemotaxis protein CheC -- inhibitor of MCP methylation. | Streptothricin acetyltransferase. | 0.410 |
AB434_3750 | AB434_2659 | AB434_3750 | AB434_2659 | Antibiotic biosynthesis monooxygenase domain-containing protein. | Streptothricin acetyltransferase. | 0.671 |
guaA | AB434_2659 | AB434_0836 | AB434_2659 | GMP synthase; Catalyzes the synthesis of GMP from XMP. | Streptothricin acetyltransferase. | 0.421 |