Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_2740 | AB434_2743 | Flagellar assembly protein FliH. | Flagellar protein FlbB. | 0.952 |
AB434_2740 | AB434_2744 | Flagellar assembly protein FliH. | Flagellar hook-length control protein FliK. | 0.944 |
AB434_2740 | AB434_2745 | Flagellar assembly protein FliH. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.927 |
AB434_2740 | AB434_2746 | Flagellar assembly protein FliH. | Hypothetical protein. | 0.714 |
AB434_2740 | AB434_2747 | Flagellar assembly protein FliH. | Flagellar basal-body rod protein FlgG. | 0.811 |
AB434_2740 | AB434_2748 | Flagellar assembly protein FliH. | Flagellar protein FlbD. | 0.672 |
AB434_2740 | AB434_2749 | Flagellar assembly protein FliH. | Flagellar biosynthesis protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.873 |
AB434_2740 | AB434_2750 | Flagellar assembly protein FliH. | Flagellar motor switch protein FliM; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation; Belongs to the FliM family. | 0.939 |
AB434_2740 | AB434_2751 | Flagellar assembly protein FliH. | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.996 |
AB434_2740 | AB434_2764 | Flagellar assembly protein FliH. | Chemotaxis protein CheC -- inhibitor of MCP methylation. | 0.673 |
AB434_2743 | AB434_2740 | Flagellar protein FlbB. | Flagellar assembly protein FliH. | 0.952 |
AB434_2743 | AB434_2744 | Flagellar protein FlbB. | Flagellar hook-length control protein FliK. | 0.989 |
AB434_2743 | AB434_2745 | Flagellar protein FlbB. | Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein. | 0.952 |
AB434_2743 | AB434_2746 | Flagellar protein FlbB. | Hypothetical protein. | 0.785 |
AB434_2743 | AB434_2747 | Flagellar protein FlbB. | Flagellar basal-body rod protein FlgG. | 0.745 |
AB434_2743 | AB434_2748 | Flagellar protein FlbB. | Flagellar protein FlbD. | 0.700 |
AB434_2743 | AB434_2749 | Flagellar protein FlbB. | Flagellar biosynthesis protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family. | 0.994 |
AB434_2743 | AB434_2750 | Flagellar protein FlbB. | Flagellar motor switch protein FliM; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation; Belongs to the FliM family. | 0.952 |
AB434_2743 | AB434_2751 | Flagellar protein FlbB. | Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. | 0.986 |
AB434_2743 | AB434_2764 | Flagellar protein FlbB. | Chemotaxis protein CheC -- inhibitor of MCP methylation. | 0.699 |
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