Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AB434_0114 | AB434_2472 | Serine protein kinase (prkA protein), P-loop containing. | Iron-binding ferritin-like antioxidant protein; Belongs to the Dps family. | 0.407 |
AB434_0114 | AB434_3115 | Serine protein kinase (prkA protein), P-loop containing. | Iron-binding ferritin-like antioxidant protein; Belongs to the Dps family. | 0.407 |
AB434_0114 | AB434_3753 | Serine protein kinase (prkA protein), P-loop containing. | Hypothetical protein. | 0.405 |
AB434_0114 | AB434_3923 | Serine protein kinase (prkA protein), P-loop containing. | Iron-binding ferritin-like antioxidant protein; Belongs to the Dps family. | 0.407 |
AB434_1346 | AB434_3753 | DnaD domain protein. | Hypothetical protein. | 0.436 |
AB434_1702 | AB434_3753 | FMN-dependent NADH-azoreductase. | Hypothetical protein. | 0.407 |
AB434_2472 | AB434_0114 | Iron-binding ferritin-like antioxidant protein; Belongs to the Dps family. | Serine protein kinase (prkA protein), P-loop containing. | 0.407 |
AB434_2472 | AB434_3753 | Iron-binding ferritin-like antioxidant protein; Belongs to the Dps family. | Hypothetical protein. | 0.442 |
AB434_3115 | AB434_0114 | Iron-binding ferritin-like antioxidant protein; Belongs to the Dps family. | Serine protein kinase (prkA protein), P-loop containing. | 0.407 |
AB434_3115 | AB434_3753 | Iron-binding ferritin-like antioxidant protein; Belongs to the Dps family. | Hypothetical protein. | 0.442 |
AB434_3751 | AB434_3752 | Hypothetical protein. | Transcriptional regulator, PadR family. | 0.928 |
AB434_3751 | AB434_3753 | Hypothetical protein. | Hypothetical protein. | 0.462 |
AB434_3752 | AB434_3751 | Transcriptional regulator, PadR family. | Hypothetical protein. | 0.928 |
AB434_3752 | AB434_3753 | Transcriptional regulator, PadR family. | Hypothetical protein. | 0.483 |
AB434_3753 | AB434_0114 | Hypothetical protein. | Serine protein kinase (prkA protein), P-loop containing. | 0.405 |
AB434_3753 | AB434_1346 | Hypothetical protein. | DnaD domain protein. | 0.436 |
AB434_3753 | AB434_1702 | Hypothetical protein. | FMN-dependent NADH-azoreductase. | 0.407 |
AB434_3753 | AB434_2472 | Hypothetical protein. | Iron-binding ferritin-like antioxidant protein; Belongs to the Dps family. | 0.442 |
AB434_3753 | AB434_3115 | Hypothetical protein. | Iron-binding ferritin-like antioxidant protein; Belongs to the Dps family. | 0.442 |
AB434_3753 | AB434_3751 | Hypothetical protein. | Hypothetical protein. | 0.462 |
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