Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AB434_3833 | AB434_3834 | AB434_3833 | AB434_3834 | Hypothetical protein. | Hypothetical protein. | 0.773 |
AB434_3833 | AB434_3836 | AB434_3833 | AB434_3836 | Hypothetical protein. | Hypothetical protein. | 0.636 |
AB434_3833 | AB434_3837 | AB434_3833 | AB434_3837 | Hypothetical protein. | Formate dehydrogenase related protein. | 0.478 |
AB434_3833 | AB434_3838 | AB434_3833 | AB434_3838 | Hypothetical protein. | Hypothetical protein. | 0.454 |
AB434_3833 | fdhD | AB434_3833 | AB434_3835 | Hypothetical protein. | Formate dehydrogenase chain D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.773 |
AB434_3833 | tyrS | AB434_3833 | AB434_3832 | Hypothetical protein. | Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.447 |
AB434_3834 | AB434_3833 | AB434_3834 | AB434_3833 | Hypothetical protein. | Hypothetical protein. | 0.773 |
AB434_3834 | AB434_3836 | AB434_3834 | AB434_3836 | Hypothetical protein. | Hypothetical protein. | 0.636 |
AB434_3834 | AB434_3837 | AB434_3834 | AB434_3837 | Hypothetical protein. | Formate dehydrogenase related protein. | 0.478 |
AB434_3834 | AB434_3838 | AB434_3834 | AB434_3838 | Hypothetical protein. | Hypothetical protein. | 0.454 |
AB434_3834 | fdhD | AB434_3834 | AB434_3835 | Hypothetical protein. | Formate dehydrogenase chain D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.773 |
AB434_3834 | tyrS | AB434_3834 | AB434_3832 | Hypothetical protein. | Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.447 |
AB434_3836 | AB434_3833 | AB434_3836 | AB434_3833 | Hypothetical protein. | Hypothetical protein. | 0.636 |
AB434_3836 | AB434_3834 | AB434_3836 | AB434_3834 | Hypothetical protein. | Hypothetical protein. | 0.636 |
AB434_3836 | AB434_3837 | AB434_3836 | AB434_3837 | Hypothetical protein. | Formate dehydrogenase related protein. | 0.572 |
AB434_3836 | AB434_3838 | AB434_3836 | AB434_3838 | Hypothetical protein. | Hypothetical protein. | 0.541 |
AB434_3836 | fdhD | AB434_3836 | AB434_3835 | Hypothetical protein. | Formate dehydrogenase chain D; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.636 |
AB434_3837 | AB434_3833 | AB434_3837 | AB434_3833 | Formate dehydrogenase related protein. | Hypothetical protein. | 0.478 |
AB434_3837 | AB434_3834 | AB434_3837 | AB434_3834 | Formate dehydrogenase related protein. | Hypothetical protein. | 0.478 |
AB434_3837 | AB434_3836 | AB434_3837 | AB434_3836 | Formate dehydrogenase related protein. | Hypothetical protein. | 0.572 |
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