Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AB434_1133 | AB434_1134 | AB434_1133 | AB434_1134 | Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family. | Chromosome (plasmid) partitioning protein ParA. | 0.995 |
AB434_1133 | AB434_3865 | AB434_1133 | AB434_3865 | Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family. | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.761 |
AB434_1133 | noc | AB434_1133 | AB434_1136 | Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family. | Chromosome (plasmid) partitioning protein ParB; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family. | 0.865 |
AB434_1133 | polA | AB434_1133 | AB434_3781 | Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.600 |
AB434_1134 | AB434_1133 | AB434_1134 | AB434_1133 | Chromosome (plasmid) partitioning protein ParA. | Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family. | 0.995 |
AB434_1134 | AB434_3865 | AB434_1134 | AB434_3865 | Chromosome (plasmid) partitioning protein ParA. | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.649 |
AB434_1134 | noc | AB434_1134 | AB434_1136 | Chromosome (plasmid) partitioning protein ParA. | Chromosome (plasmid) partitioning protein ParB; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family. | 0.977 |
AB434_2437 | AB434_3865 | AB434_2437 | AB434_3865 | 6 kDa early secretory antigenic target ESAT-6 (EsxA); Belongs to the WXG100 family. | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.807 |
AB434_3310 | AB434_3865 | AB434_3310 | AB434_3865 | SSU ribosomal protein S1p. | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.555 |
AB434_3310 | polA | AB434_3310 | AB434_3781 | SSU ribosomal protein S1p. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.620 |
AB434_3310 | rpoC | AB434_3310 | AB434_1266 | SSU ribosomal protein S1p. | DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.964 |
AB434_3864 | AB434_3865 | AB434_3864 | AB434_3865 | Hypothetical protein. | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 0.686 |
AB434_3864 | AB434_3866 | AB434_3864 | AB434_3866 | Hypothetical protein. | Lipoprotein yhcN precursor. | 0.455 |
AB434_3865 | AB434_1133 | AB434_3865 | AB434_1133 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family. | 0.761 |
AB434_3865 | AB434_1134 | AB434_3865 | AB434_1134 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Chromosome (plasmid) partitioning protein ParA. | 0.649 |
AB434_3865 | AB434_2437 | AB434_3865 | AB434_2437 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | 6 kDa early secretory antigenic target ESAT-6 (EsxA); Belongs to the WXG100 family. | 0.807 |
AB434_3865 | AB434_3310 | AB434_3865 | AB434_3310 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | SSU ribosomal protein S1p. | 0.555 |
AB434_3865 | AB434_3864 | AB434_3865 | AB434_3864 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Hypothetical protein. | 0.686 |
AB434_3865 | AB434_3866 | AB434_3865 | AB434_3866 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Lipoprotein yhcN precursor. | 0.556 |
AB434_3865 | divIB | AB434_3865 | AB434_2605 | Cell division protein FtsK; Belongs to the FtsK/SpoIIIE/SftA family. | Cell division protein FtsQ; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily. | 0.546 |
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