Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCP_0101860 | SCP_0104430 | A0A401G574 | A0A401G5X5 | MARVEL domain-containing protein. | Protein polybromo-1. | 0.773 |
SCP_0101860 | SCP_0105040 | A0A401G574 | A0A401G641 | MARVEL domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.668 |
SCP_0101860 | SCP_0114360 | A0A401G574 | A0A401G8R3 | MARVEL domain-containing protein. | Uncharacterized protein. | 0.773 |
SCP_0101860 | SCP_0204660 | A0A401G574 | A0A401GAS2 | MARVEL domain-containing protein. | Actin-related protein; Belongs to the actin family. | 0.850 |
SCP_0101860 | SCP_0310180 | A0A401G574 | A0A401GGP6 | MARVEL domain-containing protein. | SWIB domain-containing protein. | 0.779 |
SCP_0101860 | SCP_0311240 | A0A401G574 | A0A401GGZ1 | MARVEL domain-containing protein. | Chromatin structure-remodeling complex subunit sfh1. | 0.890 |
SCP_0101860 | SCP_0506670 | A0A401G574 | A0A401GN39 | MARVEL domain-containing protein. | SNF5-domain-containing protein. | 0.786 |
SCP_0101860 | SCP_0510450 | A0A401G574 | A0A401GP47 | MARVEL domain-containing protein. | SWIRM-domain-containing protein. | 0.851 |
SCP_0101860 | SCP_1005500 | A0A401G574 | A0A401GYR9 | MARVEL domain-containing protein. | SWI/SNF and RSC complexes subunit ssr3. | 0.849 |
SCP_0101860 | SCP_1302720 | A0A401G574 | A0A401H1Y9 | MARVEL domain-containing protein. | U1 small nuclear ribonucleoprotein 70 kDa homolog. | 0.676 |
SCP_0104430 | SCP_0101860 | A0A401G5X5 | A0A401G574 | Protein polybromo-1. | MARVEL domain-containing protein. | 0.773 |
SCP_0104430 | SCP_0105040 | A0A401G5X5 | A0A401G641 | Protein polybromo-1. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.922 |
SCP_0104430 | SCP_0114360 | A0A401G5X5 | A0A401G8R3 | Protein polybromo-1. | Uncharacterized protein. | 0.964 |
SCP_0104430 | SCP_0204660 | A0A401G5X5 | A0A401GAS2 | Protein polybromo-1. | Actin-related protein; Belongs to the actin family. | 0.979 |
SCP_0104430 | SCP_0310180 | A0A401G5X5 | A0A401GGP6 | Protein polybromo-1. | SWIB domain-containing protein. | 0.937 |
SCP_0104430 | SCP_0311240 | A0A401G5X5 | A0A401GGZ1 | Protein polybromo-1. | Chromatin structure-remodeling complex subunit sfh1. | 0.970 |
SCP_0104430 | SCP_0506670 | A0A401G5X5 | A0A401GN39 | Protein polybromo-1. | SNF5-domain-containing protein. | 0.979 |
SCP_0104430 | SCP_0510450 | A0A401G5X5 | A0A401GP47 | Protein polybromo-1. | SWIRM-domain-containing protein. | 0.983 |
SCP_0104430 | SCP_1005500 | A0A401G5X5 | A0A401GYR9 | Protein polybromo-1. | SWI/SNF and RSC complexes subunit ssr3. | 0.981 |
SCP_0105040 | SCP_0101860 | A0A401G641 | A0A401G574 | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | MARVEL domain-containing protein. | 0.668 |
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