STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP_010401025S rRNA (Uridine-N(3))-methyltransferase. (326 aa)    
Predicted Functional Partners:
SCP_0205450
Ribosomal RNA-processing protein 8; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of adenine in helix 25.1 in 25S rRNA. Required both for ribosomal 40S and 60S subunits biogenesis. Required for efficient pre-rRNA cleavage at site A2. Belongs to the methyltransferase superfamily. RRP8 family.
   
  
 0.761
SCP_0413400
Ribosome production factor 2 homolog.
   
    0.615
SCP_1302170
Probable assembly chaperone of.
   
    0.614
SCP_0101910
Ig-like domain-containing protein.
   
 
  0.584
SCP_0701980
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
   
 
  0.584
SCP_0701810
Uncharacterized protein.
   
 
  0.584
SCP_0401300
Ribosome biogenesis protein.
   
  
 0.570
SCP_0403960
25S rRNA (Cytosine-C(5))-methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.568
SCP_0206040
Uncharacterized protein.
   
  
 0.532
SCP_0108760
rRNA biogenesis protein.
   
    0.531
Your Current Organism:
Sparassis crispa
NCBI taxonomy Id: 139825
Other names: S. crispa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.