STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCP_0206230U1 small nuclear ribonucleoprotein. (260 aa)    
Predicted Functional Partners:
SCP_0112860
U2 small nuclear ribonucleoprotein A.
   
 0.997
SCP_0113600
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.997
SCP_0112670
Small nuclear ribonucleoprotein Sm D2.
   
 0.996
SCP_0204410
Small nuclear ribonucleoprotein.
   
 0.996
SCP_0207810
Small nuclear ribonucleoprotein G.
   
 0.996
SCP_0902790
Small nuclear ribonucleoprotein-associated protein.
   
 0.996
SCP_1201550
Pre-mRNA-splicing factor CWC2.
    
 0.992
SCP_0211660
Pre-mRNA-splicing factor sap61.
   
 0.990
SCP_0103910
Pre-mRNA-splicing factor cwf10.
   
 
 0.988
SCP_0209810
Pre-mRNA-splicing factor cwf14.
   
 
 0.987
Your Current Organism:
Sparassis crispa
NCBI taxonomy Id: 139825
Other names: S. crispa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.